Dca16357.1
Annotation
- 2-exons
- f-1
- sp|F4NCH8_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- sp|Q9SJ38_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g05200#GO:0004523;GO:0003723;GO:0003964;GO:0006278#3F1P0C
- Repeat List (scaffold1807)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16357.1 |
4 |
553 |
577 |
35 |
550 |
37 |
2e-99
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCH8_BETVU |
272 |
809 |
1365 |
39.41 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16357.1 |
59 |
473 |
577 |
23.91 |
415 |
34 |
7e-61
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
251 |
643 |
857 |
45.85 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1807 |
Augustus |
mRNA |
48234 |
50058 |
. |
+ |
. |
ID=Dca16357.1;Parent=Dca16357 |
| scaffold1807 |
Augustus |
exon |
48234 |
49748 |
. |
+ |
. |
ID=Dca16357.1.exon1;Parent=Dca16357.1 |
| scaffold1807 |
Augustus |
exon |
49840 |
50058 |
. |
+ |
. |
ID=Dca16357.1.exon2;Parent=Dca16357.1 |
