Carnation DB

Dca16541.1

Annotation

5-exons
f-1
sp|B9HVP7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_805077#GO:0016021;GO:0005215;GO:0006857#1F1P1C
Os03t0719900-04 Similar to Peptide transporter 1.
Repeat List (scaffold182)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16541.1	7	586	590	71.18	580	73	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HVP7_POPTR	5	584	584	99.31

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16541.1	1	587	590	65.76	587	66	0
Target_name	Start	End	Length	Cov(%)
Os03t0719900-04	4	593	594	99.32

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold182	Augus-PASA	mRNA	131878	134654	.	+	.	ID=Dca16541.1;Parent=Dca16541
scaffold182	Augus-PASA	exon	131878	131937	.	+	.	ID=Dca16541.1.exon1;Parent=Dca16541.1
scaffold182	Augus-PASA	exon	132647	132752	.	+	.	ID=Dca16541.1.exon2;Parent=Dca16541.1
scaffold182	Augus-PASA	exon	132862	133079	.	+	.	ID=Dca16541.1.exon3;Parent=Dca16541.1
scaffold182	Augustus	exon	133171	133727	.	+	.	ID=Dca16541.1.exon4;Parent=Dca16541.1
scaffold182	Augustus	exon	133823	134654	.	+	.	ID=Dca16541.1.exon5;Parent=Dca16541.1