Carnation DB

Dca16669.1

Annotation

6-exons
f-1
sp|B9HI08_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_820458#unknown#0F0P0C
Os01t0777000-00 Vacuolar protein sorting-associated protein 51 domain containing protein.
Repeat List (scaffold183)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16669.1	1	1052	1052	66.15	1052	66	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HI08_POPTR	16	1071	1071	98.59

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16669.1	2	1051	1052	61.31	1050	61	0
Target_name	Start	End	Length	Cov(%)
AT5G16300.1	21	1068	1068	98.12

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold183	Augustus	mRNA	144812	148627	.	+	.	ID=Dca16669.1;Parent=Dca16669
scaffold183	Augustus	exon	144812	146989	.	+	.	ID=Dca16669.1.exon1;Parent=Dca16669.1
scaffold183	Augustus	exon	147088	147282	.	+	.	ID=Dca16669.1.exon2;Parent=Dca16669.1
scaffold183	Augustus	exon	147414	147682	.	+	.	ID=Dca16669.1.exon3;Parent=Dca16669.1
scaffold183	Augustus	exon	147764	147943	.	+	.	ID=Dca16669.1.exon4;Parent=Dca16669.1
scaffold183	Augustus	exon	148061	148235	.	+	.	ID=Dca16669.1.exon5;Parent=Dca16669.1
scaffold183	Augustus	exon	148466	148627	.	+	.	ID=Dca16669.1.exon6;Parent=Dca16669.1