Carnation DB

Dca16707.1

Annotation

5-exons
f-1
sp|G5DWG0_SILLA#Putative uncharacterized protein#Silene latifolia (White campion) (Bladder campion)#unknown#unknown#0F0P0C
AT3G12930.1 | Symbols: | Lojap-related protein | chr3:4128465-4129616 FORWARD LENGTH=238
Repeat List (scaffold1832)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16707.1	68	225	226	65.92	158	95	2e-75
Target_name	Start	End	Length	Cov(%)
sp\|G5DWG0_SILLA	1	158	158	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16707.1	68	221	226	53.98	154	80	3e-69
Target_name	Start	End	Length	Cov(%)
AT3G12930.1	80	233	238	64.7

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1832	Augustus	mRNA	51119	55375	.	+	.	ID=Dca16707.1;Parent=Dca16707
scaffold1832	Augustus	exon	51119	51322	.	+	.	ID=Dca16707.1.exon1;Parent=Dca16707.1
scaffold1832	Augustus	exon	51761	51887	.	+	.	ID=Dca16707.1.exon2;Parent=Dca16707.1
scaffold1832	Augus-PASA	exon	52246	52384	.	+	.	ID=Dca16707.1.exon3;Parent=Dca16707.1
scaffold1832	Augus-PASA	exon	52490	52578	.	+	.	ID=Dca16707.1.exon4;Parent=Dca16707.1
scaffold1832	Augus-PASA	exon	55254	55375	.	+	.	ID=Dca16707.1.exon5;Parent=Dca16707.1