Carnation DB

Dca1674.1

Annotation

7-exons
f-1
sp|Q9LKG1_MESCR#Histone deacetylase#Mesembryanthemum crystallinum (Common ice plant) (Cryophytum crystallinum)#Name=Hdeac1#GO:0005634;GO:0034739;GO:0032041;GO:0046969;GO:0046970;GO:0006355;GO:0006351#4F2P1C
Repeat List (scaffold10516)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1674.1	1	495	495	85.65	495	85	0
Target_name	Start	End	Length	Cov(%)
sp\|Q9LKG1_MESCR	1	500	500	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1674.1	1	489	495	80.4	489	81	0
Target_name	Start	End	Length	Cov(%)
AT4G38130.1	1	495	501	98.8

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10516	Augus-PASA	mRNA	1962	5180	.	-	.	ID=Dca1674.1;Parent=Dca1674
scaffold10516	Augus-PASA	exon	1962	2042	.	-	.	ID=Dca1674.1.exon1;Parent=Dca1674.1
scaffold10516	Augus-PASA	exon	2129	2203	.	-	.	ID=Dca1674.1.exon2;Parent=Dca1674.1
scaffold10516	Augus-PASA	exon	2302	2362	.	-	.	ID=Dca1674.1.exon3;Parent=Dca1674.1
scaffold10516	Augus-PASA	exon	2465	2535	.	-	.	ID=Dca1674.1.exon4;Parent=Dca1674.1
scaffold10516	Augus-PASA	exon	2953	3183	.	-	.	ID=Dca1674.1.exon5;Parent=Dca1674.1
scaffold10516	Augus-PASA	exon	3878	4318	.	-	.	ID=Dca1674.1.exon6;Parent=Dca1674.1
scaffold10516	Augustus	exon	4653	5180	.	-	.	ID=Dca1674.1.exon7;Parent=Dca1674.1