Dca16755.1
Annotation
- 3-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold1837)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16755.1 |
250 |
631 |
635 |
34.48 |
382 |
57 |
1e-121
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
121 |
505 |
964 |
39.93 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16755.1 |
250 |
627 |
635 |
21.1 |
378 |
31 |
2e-51
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
534 |
971 |
1428 |
30.67 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1837 |
Augustus |
mRNA |
18076 |
20665 |
. |
+ |
. |
ID=Dca16755.1;Parent=Dca16755 |
| scaffold1837 |
Augustus |
exon |
18076 |
18537 |
. |
+ |
. |
ID=Dca16755.1.exon1;Parent=Dca16755.1 |
| scaffold1837 |
Augustus |
exon |
18641 |
18929 |
. |
+ |
. |
ID=Dca16755.1.exon2;Parent=Dca16755.1 |
| scaffold1837 |
Augustus |
exon |
19509 |
20665 |
. |
+ |
. |
ID=Dca16755.1.exon3;Parent=Dca16755.1 |
