Dca16781.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold1839)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16781.1 |
1 |
517 |
566 |
48.93 |
517 |
52 |
7e-137
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
413 |
881 |
1717 |
27.31 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16781.1 |
156 |
250 |
566 |
6.18 |
95 |
37 |
9e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
191 |
192 |
48.95 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1839 |
Augustus |
mRNA |
51707 |
59591 |
. |
- |
. |
ID=Dca16781.1;Parent=Dca16781 |
| scaffold1839 |
Augustus |
exon |
51707 |
51882 |
. |
- |
. |
ID=Dca16781.1.exon1;Parent=Dca16781.1 |
| scaffold1839 |
Augustus |
exon |
57972 |
59276 |
. |
- |
. |
ID=Dca16781.1.exon2;Parent=Dca16781.1 |
| scaffold1839 |
Augustus |
exon |
59372 |
59591 |
. |
- |
. |
ID=Dca16781.1.exon3;Parent=Dca16781.1 |
