Carnation DB

Dca16794.1

Annotation

11-exons
f-1
sp|B9H8I8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_205730#unknown#0F0P0C
sp|B9S4U3_RICCO#Ribokinase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0992730#GO:0008865#1F0P0C
Repeat List (scaffold184)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16794.1	282	634	641	35.56	353	65	7e-135
Target_name	Start	End	Length	Cov(%)
sp\|B9H8I8_POPTR	42	393	394	89.34

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16794.1	282	636	641	32.6	355	59	5e-122
Target_name	Start	End	Length	Cov(%)
Os03t0164700-01	111	464	471	75.15

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold184	Augustus	mRNA	57796	66040	.	+	.	ID=Dca16794.1;Parent=Dca16794
scaffold184	Augustus	exon	57796	57973	.	+	.	ID=Dca16794.1.exon1;Parent=Dca16794.1
scaffold184	Augus-PASA	exon	58725	58847	.	+	.	ID=Dca16794.1.exon2;Parent=Dca16794.1
scaffold184	Augus-PASA	exon	59087	59184	.	+	.	ID=Dca16794.1.exon3;Parent=Dca16794.1
scaffold184	Augus-PASA	exon	59288	59414	.	+	.	ID=Dca16794.1.exon4;Parent=Dca16794.1
scaffold184	Augus-PASA	exon	59989	60074	.	+	.	ID=Dca16794.1.exon5;Parent=Dca16794.1
scaffold184	Augus-PASA	exon	60350	60475	.	+	.	ID=Dca16794.1.exon6;Parent=Dca16794.1
scaffold184	Augustus	exon	60938	61045	.	+	.	ID=Dca16794.1.exon7;Parent=Dca16794.1
scaffold184	Augustus	exon	64446	64696	.	+	.	ID=Dca16794.1.exon8;Parent=Dca16794.1
scaffold184	Augustus	exon	64815	65106	.	+	.	ID=Dca16794.1.exon9;Parent=Dca16794.1
scaffold184	Augustus	exon	65190	65342	.	+	.	ID=Dca16794.1.exon10;Parent=Dca16794.1
scaffold184	Augustus	exon	65657	66040	.	+	.	ID=Dca16794.1.exon11;Parent=Dca16794.1