Dca16941.1
Annotation
- 3-exons
- f-1
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold18503)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16941.1 |
1 |
833 |
836 |
44.13 |
833 |
40 |
9e-170
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2AA50_ASPOF |
72 |
989 |
1788 |
51.34 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16941.1 |
658 |
834 |
836 |
7.77 |
177 |
37 |
1e-25
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
229 |
387 |
707 |
22.48 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold18503 |
Augustus |
mRNA |
3 |
3312 |
. |
+ |
. |
ID=Dca16941.1;Parent=Dca16941 |
| scaffold18503 |
Augustus |
exon |
3 |
1263 |
. |
+ |
. |
ID=Dca16941.1.exon1;Parent=Dca16941.1 |
| scaffold18503 |
Augustus |
exon |
1894 |
3131 |
. |
+ |
. |
ID=Dca16941.1.exon2;Parent=Dca16941.1 |
| scaffold18503 |
Augustus |
exon |
3301 |
3312 |
. |
+ |
. |
ID=Dca16941.1.exon3;Parent=Dca16941.1 |
