Carnation DB

Dca16954.1

Annotation

5-exons
f-1
sp|D7TVM0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0025g02130#GO:0005815;GO:0000922;GO:0000226#0F1P2C
Repeat List (scaffold1851)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16954.1	5	141	156	40.38	137	46	1e-21
Target_name	Start	End	Length	Cov(%)
sp\|D7TVM0_VITVI	4	132	147	87.75

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16954.1	1	100	156	28.84	100	45	2e-16
Target_name	Start	End	Length	Cov(%)
AT1G80245.1	1	102	127	80.31

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1851	Augustus	mRNA	58508	61560	.	+	.	ID=Dca16954.1;Parent=Dca16954
scaffold1851	Augustus	exon	58508	58588	.	+	.	ID=Dca16954.1.exon1;Parent=Dca16954.1
scaffold1851	Augus-PASA	exon	59847	59949	.	+	.	ID=Dca16954.1.exon2;Parent=Dca16954.1
scaffold1851	Augus-PASA	exon	60553	60754	.	+	.	ID=Dca16954.1.exon3;Parent=Dca16954.1
scaffold1851	Augus-PASA	exon	61370	61444	.	+	.	ID=Dca16954.1.exon4;Parent=Dca16954.1
scaffold1851	Augus-PASA	exon	61551	61560	.	+	.	ID=Dca16954.1.exon5;Parent=Dca16954.1