Carnation DB

Dca17082.1

Annotation

5-exons
f-1
sp|Q2R1R7_ORYSJ#AT hook motif-containing protein, putative#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g38300#GO:0005524;GO:0004386#2F0P0C
Repeat List (scaffold186)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17082.1	1	1281	1288	48.68	1281	48	0
Target_name	Start	End	Length	Cov(%)
sp\|Q2R1R7_ORYSJ	317	1618	1618	80.46

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17082.1	1	421	1288	13.19	421	41	5e-82
Target_name	Start	End	Length	Cov(%)
Os12t0539700-01	75	496	504	83.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold186	Augustus	mRNA	213152	217731	.	-	.	ID=Dca17082.1;Parent=Dca17082
scaffold186	Augustus	exon	213152	214452	.	-	.	ID=Dca17082.1.exon1;Parent=Dca17082.1
scaffold186	Augustus	exon	214528	214683	.	-	.	ID=Dca17082.1.exon2;Parent=Dca17082.1
scaffold186	Augustus	exon	214775	215779	.	-	.	ID=Dca17082.1.exon3;Parent=Dca17082.1
scaffold186	Augustus	exon	216244	216387	.	-	.	ID=Dca17082.1.exon4;Parent=Dca17082.1
scaffold186	Augustus	exon	216471	217731	.	-	.	ID=Dca17082.1.exon5;Parent=Dca17082.1