Dca17105.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold18613)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17105.1 |
47 |
753 |
753 |
51.66 |
707 |
50 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
345 |
1123 |
1501 |
51.89 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17105.1 |
286 |
753 |
753 |
23.77 |
468 |
38 |
1e-85
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
677 |
1117 |
1539 |
28.65 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold18613 |
Augustus |
mRNA |
543 |
3196 |
. |
- |
. |
ID=Dca17105.1;Parent=Dca17105 |
| scaffold18613 |
Augustus |
exon |
543 |
1924 |
. |
- |
. |
ID=Dca17105.1.exon1;Parent=Dca17105.1 |
| scaffold18613 |
Augustus |
exon |
2317 |
3196 |
. |
- |
. |
ID=Dca17105.1.exon2;Parent=Dca17105.1 |
