Carnation DB

Dca17139.1

Annotation

6-exons
f-1
sp|Q8LKH1_9ROSI#PIN1-like auxin transport protein#Populus tremula x Populus tremuloides#Name=pin3#GO:0016021;GO:0055085#0F1P1C
Repeat List (scaffold1865)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17139.1	1	654	654	79.35	654	78	0
Target_name	Start	End	Length	Cov(%)
sp\|Q8LKH1_9ROSI	1	640	640	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17139.1	1	654	654	77.37	654	76	0
Target_name	Start	End	Length	Cov(%)
AT1G70940.1	1	640	640	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1865	Augustus	mRNA	14659	22944	.	+	.	ID=Dca17139.1;Parent=Dca17139
scaffold1865	Augustus	exon	14659	15943	.	+	.	ID=Dca17139.1.exon1;Parent=Dca17139.1
scaffold1865	Augustus	exon	16289	16580	.	+	.	ID=Dca17139.1.exon2;Parent=Dca17139.1
scaffold1865	Augustus	exon	16953	17038	.	+	.	ID=Dca17139.1.exon3;Parent=Dca17139.1
scaffold1865	Augustus	exon	22408	22565	.	+	.	ID=Dca17139.1.exon4;Parent=Dca17139.1
scaffold1865	Augustus	exon	22672	22748	.	+	.	ID=Dca17139.1.exon5;Parent=Dca17139.1
scaffold1865	Augustus	exon	22878	22944	.	+	.	ID=Dca17139.1.exon6;Parent=Dca17139.1