Carnation DB

Dca17242.1

Annotation

6-exons
f-1
sp|B9T1Y8_RICCO#WD-repeat protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0624690#unknown#0F0P0C
Repeat List (scaffold1872)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17242.1	2	442	442	63.12	441	59	2e-159
Target_name	Start	End	Length	Cov(%)
sp\|B9T1Y8_RICCO	6	479	479	98.95

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17242.1	6	442	442	59.5	437	52	3e-141
Target_name	Start	End	Length	Cov(%)
AT3G45620.2	13	515	515	97.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1872	Augus-PASA	mRNA	11799	15715	.	+	.	ID=Dca17242.1;Parent=Dca17242
scaffold1872	Augus-PASA	exon	11799	11894	.	+	.	ID=Dca17242.1.exon1;Parent=Dca17242.1
scaffold1872	Augus-PASA	exon	13509	13760	.	+	.	ID=Dca17242.1.exon2;Parent=Dca17242.1
scaffold1872	Augus-PASA	exon	14425	14571	.	+	.	ID=Dca17242.1.exon3;Parent=Dca17242.1
scaffold1872	Augustus	exon	14656	15123	.	+	.	ID=Dca17242.1.exon4;Parent=Dca17242.1
scaffold1872	Augustus	exon	15220	15333	.	+	.	ID=Dca17242.1.exon5;Parent=Dca17242.1
scaffold1872	Augus-PASA	exon	15464	15715	.	+	.	ID=Dca17242.1.exon6;Parent=Dca17242.1