Carnation DB

Dca17245.1

Annotation

12-exons
f-1
sp|D7SKR3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g03580#GO:0003676;GO:0000166;GO:0008270#3F0P0C
sp|G7JRI8_MEDTR#CCR4-NOT transcription complex subunit#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_4g061180#GO:0003676;GO:0000166;GO:0008270#3F0P0C
Repeat List (scaffold1872)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17245.1	1	1023	1023	56.4	1023	56	0
Target_name	Start	End	Length	Cov(%)
sp\|D7SKR3_VITVI	1	1022	1022	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17245.1	669	1023	1023	15.24	355	43	5e-66
Target_name	Start	End	Length	Cov(%)
AT3G45630.1	631	989	989	36.29

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1872	Augustus	mRNA	34890	42413	.	+	.	ID=Dca17245.1;Parent=Dca17245
scaffold1872	Augustus	exon	34890	34982	.	+	.	ID=Dca17245.1.exon1;Parent=Dca17245.1
scaffold1872	Augustus	exon	35770	35897	.	+	.	ID=Dca17245.1.exon2;Parent=Dca17245.1
scaffold1872	Augustus	exon	36040	36193	.	+	.	ID=Dca17245.1.exon3;Parent=Dca17245.1
scaffold1872	Augustus	exon	36308	36417	.	+	.	ID=Dca17245.1.exon4;Parent=Dca17245.1
scaffold1872	Augustus	exon	38300	38383	.	+	.	ID=Dca17245.1.exon5;Parent=Dca17245.1
scaffold1872	Augustus	exon	38498	38546	.	+	.	ID=Dca17245.1.exon6;Parent=Dca17245.1
scaffold1872	Augustus	exon	38628	38719	.	+	.	ID=Dca17245.1.exon7;Parent=Dca17245.1
scaffold1872	Augustus	exon	39154	39286	.	+	.	ID=Dca17245.1.exon8;Parent=Dca17245.1
scaffold1872	Augustus	exon	39584	39663	.	+	.	ID=Dca17245.1.exon9;Parent=Dca17245.1
scaffold1872	Augustus	exon	40002	41470	.	+	.	ID=Dca17245.1.exon10;Parent=Dca17245.1
scaffold1872	Augustus	exon	41622	41735	.	+	.	ID=Dca17245.1.exon11;Parent=Dca17245.1
scaffold1872	Augustus	exon	41848	42413	.	+	.	ID=Dca17245.1.exon12;Parent=Dca17245.1