Carnation DB

Dca1725.1

Annotation

5-exons
f-1
sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Repeat List (scaffold10544)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1725.1	574	756	760	15.26	183	64	1e-66
Target_name	Start	End	Length	Cov(%)
sp\|G9FIF2_BETVU	1084	1266	1553	11.78

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1725.1	545	756	760	10.92	212	40	6e-37
Target_name	Start	End	Length	Cov(%)
Os04t0191000-01	1023	1227	1539	13.32

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10544	Augustus	mRNA	2709	9750	.	-	.	ID=Dca1725.1;Parent=Dca1725
scaffold10544	Augustus	exon	2709	3252	.	-	.	ID=Dca1725.1.exon1;Parent=Dca1725.1
scaffold10544	Augustus	exon	4762	4814	.	-	.	ID=Dca1725.1.exon2;Parent=Dca1725.1
scaffold10544	Augustus	exon	5968	6153	.	-	.	ID=Dca1725.1.exon3;Parent=Dca1725.1
scaffold10544	Augustus	exon	6268	6336	.	-	.	ID=Dca1725.1.exon4;Parent=Dca1725.1
scaffold10544	Augustus	exon	8320	9750	.	-	.	ID=Dca1725.1.exon5;Parent=Dca1725.1