Carnation DB

Dca17292.1

Annotation

7-exons
f-1
sp|D7STV8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g01740#GO:0003824#1F0P0C
sp|F8WLB6_CITUN#Spermidine synthase#Citrus unshiu (Satsuma mandarin) (Citrus nobilis var unshiu)#Name=ORF49#GO:0003824#1F0P0C
Repeat List (scaffold1877)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17292.1	1	226	227	79.73	226	81	4e-106
Target_name	Start	End	Length	Cov(%)
sp\|D7STV8_VITVI	111	335	336	66.96

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17292.1	1	226	227	74	226	75	7e-100
Target_name	Start	End	Length	Cov(%)
AT5G19530.1	113	337	339	66.37

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1877	Augus-PASA	mRNA	19887	21976	.	-	.	ID=Dca17292.1;Parent=Dca17292
scaffold1877	Augus-PASA	exon	19887	19965	.	-	.	ID=Dca17292.1.exon1;Parent=Dca17292.1
scaffold1877	Augus-PASA	exon	20068	20204	.	-	.	ID=Dca17292.1.exon2;Parent=Dca17292.1
scaffold1877	Augus-PASA	exon	20439	20497	.	-	.	ID=Dca17292.1.exon3;Parent=Dca17292.1
scaffold1877	Augus-PASA	exon	20622	20697	.	-	.	ID=Dca17292.1.exon4;Parent=Dca17292.1
scaffold1877	Augus-PASA	exon	20970	21129	.	-	.	ID=Dca17292.1.exon5;Parent=Dca17292.1
scaffold1877	Augus-PASA	exon	21382	21470	.	-	.	ID=Dca17292.1.exon6;Parent=Dca17292.1
scaffold1877	Augus-PASA	exon	21893	21976	.	-	.	ID=Dca17292.1.exon7;Parent=Dca17292.1