Carnation DB

Dca17321.1

Annotation

6-exons
f-1
sp|B9N3F5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_580901#unknown#0F0P0C
Os01t0237100-01 Phosphoglycerate mutase domain containing protein.
Repeat List (scaffold188)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17321.1	18	256	256	68.35	239	74	2e-107
Target_name	Start	End	Length	Cov(%)
sp\|B9N3F5_POPTR	3	241	241	99.17

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17321.1	24	256	256	68.75	233	76	1e-105
Target_name	Start	End	Length	Cov(%)
Os01t0237100-01	71	303	304	76.64

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold188	Augustus	mRNA	26851	30682	.	+	.	ID=Dca17321.1;Parent=Dca17321
scaffold188	Augustus	exon	26851	26902	.	+	.	ID=Dca17321.1.exon1;Parent=Dca17321.1
scaffold188	Augustus	exon	29570	29841	.	+	.	ID=Dca17321.1.exon2;Parent=Dca17321.1
scaffold188	Augustus	exon	29914	30013	.	+	.	ID=Dca17321.1.exon3;Parent=Dca17321.1
scaffold188	Augustus	exon	30157	30296	.	+	.	ID=Dca17321.1.exon4;Parent=Dca17321.1
scaffold188	Augustus	exon	30391	30470	.	+	.	ID=Dca17321.1.exon5;Parent=Dca17321.1
scaffold188	Augustus	exon	30556	30682	.	+	.	ID=Dca17321.1.exon6;Parent=Dca17321.1