Dca17361.1
Annotation
- 4-exons
- f-1
- sp|B9S110_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0632600#unknown#0F0P0C
- AT2G34580.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Herpesvirus UL139, cytomegalovirus (InterPro:IPR021042); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr2:14566673-14567640 REVERSE LENGTH=162
- Repeat List (scaffold1881)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17361.1 |
1 |
201 |
202 |
49 |
201 |
50 |
9e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9S110_RICCO |
1 |
201 |
222 |
90.54 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17361.1 |
1 |
160 |
202 |
36.63 |
160 |
47 |
8e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G34580.1 |
1 |
160 |
162 |
98.76 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1881 |
Augustus |
mRNA |
18033 |
19754 |
. |
+ |
. |
ID=Dca17361.1;Parent=Dca17361 |
| scaffold1881 |
Augustus |
exon |
18033 |
18110 |
. |
+ |
. |
ID=Dca17361.1.exon1;Parent=Dca17361.1 |
| scaffold1881 |
Augustus |
exon |
18202 |
18389 |
. |
+ |
. |
ID=Dca17361.1.exon2;Parent=Dca17361.1 |
| scaffold1881 |
Augustus |
exon |
18652 |
18814 |
. |
+ |
. |
ID=Dca17361.1.exon3;Parent=Dca17361.1 |
| scaffold1881 |
Augustus |
exon |
19575 |
19754 |
. |
+ |
. |
ID=Dca17361.1.exon4;Parent=Dca17361.1 |
