Carnation DB

Dca17462.1

Annotation

7-exons
f-1
sp|D7U432_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0044g00490#GO:0031072#1F0P0C
Os04t0687300-01 Molecular chaperone, heat shock protein, Hsp40, DnaJ domain containing protein.
Repeat List (scaffold189)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17462.1	30	273	273	39.56	244	43	1e-42
Target_name	Start	End	Length	Cov(%)
sp\|D7U432_VITVI	37	285	285	87.36

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17462.1	8	273	273	37.36	266	37	7e-33
Target_name	Start	End	Length	Cov(%)
Os04t0687300-01	9	274	275	96.72

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold189	Augus-PASA	mRNA	86267	90188	.	+	.	ID=Dca17462.1;Parent=Dca17462
scaffold189	Augus-PASA	exon	86267	86395	.	+	.	ID=Dca17462.1.exon1;Parent=Dca17462.1
scaffold189	Augus-PASA	exon	88284	88313	.	+	.	ID=Dca17462.1.exon2;Parent=Dca17462.1
scaffold189	Augus-PASA	exon	88403	88504	.	+	.	ID=Dca17462.1.exon3;Parent=Dca17462.1
scaffold189	Augus-PASA	exon	88881	88998	.	+	.	ID=Dca17462.1.exon4;Parent=Dca17462.1
scaffold189	Augus-PASA	exon	89213	89525	.	+	.	ID=Dca17462.1.exon5;Parent=Dca17462.1
scaffold189	Augus-PASA	exon	89702	89756	.	+	.	ID=Dca17462.1.exon6;Parent=Dca17462.1
scaffold189	Augus-PASA	exon	90114	90188	.	+	.	ID=Dca17462.1.exon7;Parent=Dca17462.1