Dca17549.1
Annotation
- 4-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold1897)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17549.1 |
59 |
782 |
860 |
41.86 |
724 |
46 |
1e-174
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
9 |
750 |
1717 |
43.21 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17549.1 |
570 |
662 |
860 |
3.83 |
93 |
36 |
2e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1897 |
Augustus |
mRNA |
23482 |
27036 |
. |
+ |
. |
ID=Dca17549.1;Parent=Dca17549 |
| scaffold1897 |
Augustus |
exon |
23482 |
24502 |
. |
+ |
. |
ID=Dca17549.1.exon1;Parent=Dca17549.1 |
| scaffold1897 |
Augustus |
exon |
24578 |
25720 |
. |
+ |
. |
ID=Dca17549.1.exon2;Parent=Dca17549.1 |
| scaffold1897 |
Augustus |
exon |
25828 |
26163 |
. |
+ |
. |
ID=Dca17549.1.exon3;Parent=Dca17549.1 |
| scaffold1897 |
Augustus |
exon |
26954 |
27036 |
. |
+ |
. |
ID=Dca17549.1.exon4;Parent=Dca17549.1 |
