Dca17584.1
Annotation
- 4-exons
- f-1
- sp|D7L721_ARALL#Exopolygalacturonase#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_478122#GO:0005576;GO:0004650;GO:0005975;GO:0007047#1F2P1C
- Repeat List (scaffold19)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17584.1 |
80 |
426 |
432 |
49.3 |
347 |
62 |
4e-120
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7L721_ARALL |
97 |
441 |
449 |
76.83 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17584.1 |
91 |
426 |
432 |
47.91 |
336 |
62 |
2e-118
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G14040.1 |
102 |
437 |
445 |
75.5 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold19 |
Augustus |
mRNA |
6271 |
9824 |
. |
+ |
. |
ID=Dca17584.1;Parent=Dca17584 |
| scaffold19 |
Augustus |
exon |
6271 |
6495 |
. |
+ |
. |
ID=Dca17584.1.exon1;Parent=Dca17584.1 |
| scaffold19 |
Augustus |
exon |
8433 |
8753 |
. |
+ |
. |
ID=Dca17584.1.exon2;Parent=Dca17584.1 |
| scaffold19 |
Augustus |
exon |
8870 |
9385 |
. |
+ |
. |
ID=Dca17584.1.exon3;Parent=Dca17584.1 |
| scaffold19 |
Augustus |
exon |
9588 |
9824 |
. |
+ |
. |
ID=Dca17584.1.exon4;Parent=Dca17584.1 |
