Dca17700.1
Annotation
- 3-exons
- f-1
- sp|C5YMB8_SORBI#Putative uncharacterized protein Sb07g023090#Sorghum bicolor (Sorghum) (Sorghum vulgare)#Name=Sb07g023090#GO:0003677;GO:0004803;GO:0008270;GO:0006313#3F1P0C
- sp|Q6AVM7_ORYSJ#Putative polyprotein#Oryza sativa subsp japonica (Rice)#Name=OJ1119_H02.16#GO:0003677;GO:0004803;GO:0008270;GO:0006313#3F1P0C
- Repeat List (scaffold1901)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17700.1 |
3 |
364 |
426 |
33.09 |
362 |
39 |
3e-71
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|C5YMB8_SORBI |
372 |
731 |
861 |
41.81 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17700.1 |
3 |
417 |
426 |
33.8 |
415 |
35 |
5e-64
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0704400-02 |
334 |
744 |
805 |
51.05 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1901 |
Augustus |
mRNA |
55687 |
57301 |
. |
- |
. |
ID=Dca17700.1;Parent=Dca17700 |
| scaffold1901 |
Augustus |
exon |
55687 |
56646 |
. |
- |
. |
ID=Dca17700.1.exon1;Parent=Dca17700.1 |
| scaffold1901 |
Augustus |
exon |
56877 |
57020 |
. |
- |
. |
ID=Dca17700.1.exon2;Parent=Dca17700.1 |
| scaffold1901 |
Augustus |
exon |
57125 |
57301 |
. |
- |
. |
ID=Dca17700.1.exon3;Parent=Dca17700.1 |
