Dca17716.1
Annotation
- 2-exons
- f-1
- sp|D7TMR3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0100g01250#unknown#0F0P0C
- AT5G52220.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Chromosome transmission fidelity protein 8 (InterPro:IPR018607); Has 127 Blast hits to 127 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 70; Fungi - 17; Plants - 31; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). | chr5:21207097-21207678 REVERSE LENGTH=145
- Repeat List (scaffold1903)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17716.1 |
4 |
120 |
125 |
63.2 |
117 |
68 |
4e-42
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7TMR3_VITVI |
3 |
118 |
140 |
82.85 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17716.1 |
4 |
124 |
125 |
58.4 |
121 |
60 |
2e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G52220.1 |
3 |
117 |
145 |
79.31 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1903 |
Augus-PASA |
mRNA |
30330 |
31370 |
. |
- |
. |
ID=Dca17716.1;Parent=Dca17716 |
| scaffold1903 |
Augus-PASA |
exon |
30330 |
30554 |
. |
- |
. |
ID=Dca17716.1.exon1;Parent=Dca17716.1 |
| scaffold1903 |
Augus-PASA |
exon |
31218 |
31370 |
. |
- |
. |
ID=Dca17716.1.exon2;Parent=Dca17716.1 |
