Dca17805.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold191)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17805.1 |
165 |
322 |
322 |
19.25 |
158 |
39 |
4e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
3 |
161 |
1501 |
10.59 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17805.1 |
211 |
320 |
322 |
10.55 |
110 |
31 |
4e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
93 |
203 |
296 |
37.5 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold191 |
Augustus |
mRNA |
62285 |
63634 |
. |
+ |
. |
ID=Dca17805.1;Parent=Dca17805 |
| scaffold191 |
Augustus |
exon |
62285 |
62731 |
. |
+ |
. |
ID=Dca17805.1.exon1;Parent=Dca17805.1 |
| scaffold191 |
Augustus |
exon |
63113 |
63634 |
. |
+ |
. |
ID=Dca17805.1.exon2;Parent=Dca17805.1 |
