Dca17984.1
Annotation
- 4-exons
- f-367
- sp|F6HR46_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0040g01530#GO:0005488#1F0P0C
- Os07t0671200-00 Pentatricopeptide repeat domain containing protein.
- Repeat List (scaffold1920)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17984.1 |
1 |
125 |
142 |
28.16 |
125 |
32 |
1e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6HR46_VITVI |
316 |
440 |
620 |
20.16 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17984.1 |
1 |
122 |
142 |
28.16 |
122 |
33 |
3e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os07t0671200-00 |
344 |
465 |
552 |
22.1 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1920 |
Augustus |
mRNA |
51753 |
53655 |
. |
- |
. |
ID=Dca17984.1;Parent=Dca17984 |
| scaffold1920 |
Augustus |
exon |
51753 |
51799 |
. |
- |
. |
ID=Dca17984.1.exon1;Parent=Dca17984.1 |
| scaffold1920 |
Augustus |
exon |
52644 |
53060 |
. |
- |
. |
ID=Dca17984.1.exon2;Parent=Dca17984.1 |
| scaffold1920 |
Augustus |
exon |
53176 |
53380 |
. |
- |
. |
ID=Dca17984.1.exon3;Parent=Dca17984.1 |
| scaffold1920 |
Augustus |
exon |
53530 |
53655 |
. |
- |
. |
ID=Dca17984.1.exon4;Parent=Dca17984.1 |
