Dca18.1
Annotation
- 4-exons
- f-1
- sp|B9I931_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_824056#unknown#0F0P0C
- sp|B9SVF1_RICCO#Synovial sarcoma associated ss18 protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0131100#unknown#0F0P0C
- Repeat List (scaffold1)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18.1 |
2 |
135 |
152 |
55.26 |
134 |
60 |
1e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9I931_POPTR |
14 |
147 |
208 |
64.42 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18.1 |
6 |
103 |
152 |
45.39 |
98 |
59 |
3e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G00850.1 |
20 |
134 |
223 |
51.56 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1 |
Augustus |
mRNA |
166636 |
168956 |
. |
+ |
. |
ID=Dca18.1;Parent=Dca18 |
| scaffold1 |
Augustus |
exon |
166636 |
166677 |
. |
+ |
. |
ID=Dca18.1.exon1;Parent=Dca18.1 |
| scaffold1 |
Augustus |
exon |
167783 |
167859 |
. |
+ |
. |
ID=Dca18.1.exon2;Parent=Dca18.1 |
| scaffold1 |
Augustus |
exon |
168183 |
168246 |
. |
+ |
. |
ID=Dca18.1.exon3;Parent=Dca18.1 |
| scaffold1 |
Augustus |
exon |
168681 |
168956 |
. |
+ |
. |
ID=Dca18.1.exon4;Parent=Dca18.1 |
