Carnation DB

Dca18015.1

Annotation

5-exons
f-1
sp|Q7X7F2_ORYSJ#OSJNBa0023J03.14 protein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0023J03.14#GO:0003676;GO:0008270#2F0P0C
Repeat List (scaffold19225)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18015.1	1	415	416	51.44	415	48	2e-105
Target_name	Start	End	Length	Cov(%)
sp\|Q7X7F2_ORYSJ	242	681	704	62.5

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18015.1	114	218	416	10.33	105	41	1e-13
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	971	1074	1401	7.42

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold19225	Augustus	mRNA	644	2562	.	-	.	ID=Dca18015.1;Parent=Dca18015
scaffold19225	Augustus	exon	644	1160	.	-	.	ID=Dca18015.1.exon1;Parent=Dca18015.1
scaffold19225	Augustus	exon	1307	1359	.	-	.	ID=Dca18015.1.exon2;Parent=Dca18015.1
scaffold19225	Augustus	exon	1561	1824	.	-	.	ID=Dca18015.1.exon3;Parent=Dca18015.1
scaffold19225	Augustus	exon	2062	2273	.	-	.	ID=Dca18015.1.exon4;Parent=Dca18015.1
scaffold19225	Augustus	exon	2358	2562	.	-	.	ID=Dca18015.1.exon5;Parent=Dca18015.1