Dca18218.1
Annotation
- 2-exons
- f-3
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold19373)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18218.1 |
26 |
494 |
516 |
58.33 |
469 |
57 |
3e-164
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2AA50_ASPOF |
702 |
1238 |
1788 |
30.03 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18218.1 |
145 |
303 |
516 |
10.07 |
159 |
33 |
2e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
10 |
150 |
591 |
23.85 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold19373 |
Augustus |
mRNA |
3642 |
5383 |
. |
- |
. |
ID=Dca18218.1;Parent=Dca18218 |
| scaffold19373 |
Augustus |
exon |
3642 |
4282 |
. |
- |
. |
ID=Dca18218.1.exon1;Parent=Dca18218.1 |
| scaffold19373 |
Augustus |
exon |
4472 |
5383 |
. |
- |
. |
ID=Dca18218.1.exon2;Parent=Dca18218.1 |
