Carnation DB

Dca18357.1

Annotation

8-exons
f-1
sp|D7U3P4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VIT_00s0229g00160#GO:0008864;GO:0016742;GO:0006189#2F1P0C
sp|B9GYC5_POPTR#Formyltetrahydrofolate deformylase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_646120#GO:0008864;GO:0016742;GO:0006189#2F1P0C
Repeat List (scaffold1947)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18357.1	1	325	325	76.92	325	76	8e-145
Target_name	Start	End	Length	Cov(%)
sp\|D7U3P4_VITVI	1	329	329	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18357.1	20	325	325	71.07	306	75	5e-137
Target_name	Start	End	Length	Cov(%)
AT4G17360.1	20	328	328	94.2

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1947	Augustus	mRNA	23287	27072	.	-	.	ID=Dca18357.1;Parent=Dca18357
scaffold1947	Augustus	exon	23287	23433	.	-	.	ID=Dca18357.1.exon1;Parent=Dca18357.1
scaffold1947	Augustus	exon	23904	23990	.	-	.	ID=Dca18357.1.exon2;Parent=Dca18357.1
scaffold1947	Augus-PASA	exon	24089	24187	.	-	.	ID=Dca18357.1.exon3;Parent=Dca18357.1
scaffold1947	Augus-PASA	exon	24903	25062	.	-	.	ID=Dca18357.1.exon4;Parent=Dca18357.1
scaffold1947	Augus-PASA	exon	25163	25236	.	-	.	ID=Dca18357.1.exon5;Parent=Dca18357.1
scaffold1947	Augus-PASA	exon	25329	25479	.	-	.	ID=Dca18357.1.exon6;Parent=Dca18357.1
scaffold1947	Augus-PASA	exon	26619	26731	.	-	.	ID=Dca18357.1.exon7;Parent=Dca18357.1
scaffold1947	Augus-PASA	exon	26926	27072	.	-	.	ID=Dca18357.1.exon8;Parent=Dca18357.1