Carnation DB

Dca18394.1

Annotation

6-exons
f-1
sp|G5DWD8_SILLA#Putative uncharacterized protein#Silene latifolia (White campion) (Bladder campion)#unknown#unknown#0F0P0C
AT4G24290.2 | Symbols: | MAC/Perforin domain-containing protein | chr4:12594856-12597815 FORWARD LENGTH=606
Repeat List (scaffold195)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18394.1	1	547	551	88.56	547	82	0
Target_name	Start	End	Length	Cov(%)
sp\|G5DWD8_SILLA	1	596	596	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18394.1	1	547	551	73.86	547	69	0
Target_name	Start	End	Length	Cov(%)
AT4G24290.2	1	598	606	98.67

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold195	Augus-PASA	mRNA	48345	54299	.	-	.	ID=Dca18394.1;Parent=Dca18394
scaffold195	Augus-PASA	exon	48345	49025	.	-	.	ID=Dca18394.1.exon1;Parent=Dca18394.1
scaffold195	Augus-PASA	exon	49554	49720	.	-	.	ID=Dca18394.1.exon2;Parent=Dca18394.1
scaffold195	Augustus	exon	50165	50270	.	-	.	ID=Dca18394.1.exon3;Parent=Dca18394.1
scaffold195	Augustus	exon	51718	51919	.	-	.	ID=Dca18394.1.exon4;Parent=Dca18394.1
scaffold195	Augus-PASA	exon	52095	52333	.	-	.	ID=Dca18394.1.exon5;Parent=Dca18394.1
scaffold195	Augus-PASA	exon	54039	54299	.	-	.	ID=Dca18394.1.exon6;Parent=Dca18394.1