Dca18538.1
Annotation
- 4-exons
- f-1
- sp|F6HH08_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0016g03530#GO:0003677;GO:0003899#2F0P0C
- AT3G22320.1 | Symbols: ATRPABC24.3, RPB5A, NRPB5, NRPD5 | Eukaryotic rpb5 RNA polymerase subunit family protein | chr3:7891045-7892094 REVERSE LENGTH=205
- Repeat List (scaffold196)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18538.1 |
1 |
209 |
209 |
50.71 |
209 |
51 |
5e-54
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6HH08_VITVI |
1 |
206 |
206 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18538.1 |
5 |
206 |
209 |
46.88 |
202 |
49 |
4e-51
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G22320.1 |
4 |
202 |
205 |
97.07 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold196 |
Augustus |
mRNA |
202335 |
203252 |
. |
+ |
. |
ID=Dca18538.1;Parent=Dca18538 |
| scaffold196 |
Augustus |
exon |
202335 |
202535 |
. |
+ |
. |
ID=Dca18538.1.exon1;Parent=Dca18538.1 |
| scaffold196 |
Augustus |
exon |
202617 |
202805 |
. |
+ |
. |
ID=Dca18538.1.exon2;Parent=Dca18538.1 |
| scaffold196 |
Augustus |
exon |
202915 |
203028 |
. |
+ |
. |
ID=Dca18538.1.exon3;Parent=Dca18538.1 |
| scaffold196 |
Augustus |
exon |
203127 |
203252 |
. |
+ |
. |
ID=Dca18538.1.exon4;Parent=Dca18538.1 |
