Carnation DB

Dca18566.1

Annotation

18-exons
f-1
sp|F6HEL5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0090g01430#GO:0008270#1F0P0C
AT5G55390.1 | Symbols: EDM2 | ENHANCED DOWNY MILDEW 2 | chr5:22448152-22454414 REVERSE LENGTH=1297
Repeat List (scaffold1962)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18566.1	1	877	1055	43.31	877	51	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HEL5_VITVI	1	898	1259	71.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18566.1	5	917	1055	39.33	913	44	0
Target_name	Start	End	Length	Cov(%)
AT5G55390.1	8	943	1297	72.16

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1962	Augustus	mRNA	36740	46447	.	-	.	ID=Dca18566.1;Parent=Dca18566
scaffold1962	Augustus	exon	36740	37447	.	-	.	ID=Dca18566.1.exon1;Parent=Dca18566.1
scaffold1962	Augustus	exon	37710	37770	.	-	.	ID=Dca18566.1.exon2;Parent=Dca18566.1
scaffold1962	Augustus	exon	37852	37970	.	-	.	ID=Dca18566.1.exon3;Parent=Dca18566.1
scaffold1962	Augustus	exon	38072	38143	.	-	.	ID=Dca18566.1.exon4;Parent=Dca18566.1
scaffold1962	Augustus	exon	39317	39430	.	-	.	ID=Dca18566.1.exon5;Parent=Dca18566.1
scaffold1962	Augus-PASA	exon	39686	39727	.	-	.	ID=Dca18566.1.exon6;Parent=Dca18566.1
scaffold1962	Augus-PASA	exon	40839	40931	.	-	.	ID=Dca18566.1.exon7;Parent=Dca18566.1
scaffold1962	Augus-PASA	exon	42241	42342	.	-	.	ID=Dca18566.1.exon8;Parent=Dca18566.1
scaffold1962	Augus-PASA	exon	42564	42711	.	-	.	ID=Dca18566.1.exon9;Parent=Dca18566.1
scaffold1962	Augustus	exon	42927	43400	.	-	.	ID=Dca18566.1.exon10;Parent=Dca18566.1
scaffold1962	Augustus	exon	43501	43590	.	-	.	ID=Dca18566.1.exon11;Parent=Dca18566.1
scaffold1962	Augustus	exon	43679	43926	.	-	.	ID=Dca18566.1.exon12;Parent=Dca18566.1
scaffold1962	Augustus	exon	44722	44820	.	-	.	ID=Dca18566.1.exon13;Parent=Dca18566.1
scaffold1962	Augustus	exon	44894	44984	.	-	.	ID=Dca18566.1.exon14;Parent=Dca18566.1
scaffold1962	Augustus	exon	45315	45454	.	-	.	ID=Dca18566.1.exon15;Parent=Dca18566.1
scaffold1962	Augustus	exon	45542	45601	.	-	.	ID=Dca18566.1.exon16;Parent=Dca18566.1
scaffold1962	Augustus	exon	45854	45950	.	-	.	ID=Dca18566.1.exon17;Parent=Dca18566.1
scaffold1962	Augustus	exon	46038	46447	.	-	.	ID=Dca18566.1.exon18;Parent=Dca18566.1