Carnation DB

Dca1859.1

Annotation

8-exons
f-1
sp|D7SZN6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0049g01850#unknown#0F0P0C
AT2G05590.2 | Symbols: | TLD-domain containing nucleolar protein | chr2:2067196-2068951 FORWARD LENGTH=303
Repeat List (scaffold106)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1859.1	10	313	313	58.14	304	58	4e-86
Target_name	Start	End	Length	Cov(%)
sp\|D7SZN6_VITVI	5	314	314	98.72

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1859.1	1	312	313	52.39	312	53	9e-83
Target_name	Start	End	Length	Cov(%)
AT2G05590.2	1	302	303	99.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold106	Augus-PASA	mRNA	199858	203672	.	+	.	ID=Dca1859.1;Parent=Dca1859
scaffold106	Augus-PASA	exon	199858	199953	.	+	.	ID=Dca1859.1.exon1;Parent=Dca1859.1
scaffold106	Augus-PASA	exon	201261	201676	.	+	.	ID=Dca1859.1.exon2;Parent=Dca1859.1
scaffold106	Augus-PASA	exon	201787	201859	.	+	.	ID=Dca1859.1.exon3;Parent=Dca1859.1
scaffold106	Augus-PASA	exon	201958	202038	.	+	.	ID=Dca1859.1.exon4;Parent=Dca1859.1
scaffold106	Augus-PASA	exon	202147	202210	.	+	.	ID=Dca1859.1.exon5;Parent=Dca1859.1
scaffold106	Augus-PASA	exon	202751	202838	.	+	.	ID=Dca1859.1.exon6;Parent=Dca1859.1
scaffold106	Augus-PASA	exon	202913	202997	.	+	.	ID=Dca1859.1.exon7;Parent=Dca1859.1
scaffold106	Augus-PASA	exon	203634	203672	.	+	.	ID=Dca1859.1.exon8;Parent=Dca1859.1