Dca18638.1
Annotation
- 3-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold19680)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18638.1 |
75 |
184 |
191 |
36.64 |
110 |
64 |
6e-37
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
776 |
885 |
896 |
12.27 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18638.1 |
75 |
181 |
191 |
21.98 |
107 |
40 |
2e-15
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1278 |
1382 |
1401 |
7.49 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold19680 |
Augustus |
mRNA |
5197 |
6982 |
. |
- |
. |
ID=Dca18638.1;Parent=Dca18638 |
| scaffold19680 |
Augustus |
exon |
5197 |
5556 |
. |
- |
. |
ID=Dca18638.1.exon1;Parent=Dca18638.1 |
| scaffold19680 |
Augustus |
exon |
6515 |
6723 |
. |
- |
. |
ID=Dca18638.1.exon2;Parent=Dca18638.1 |
| scaffold19680 |
Augustus |
exon |
6976 |
6982 |
. |
- |
. |
ID=Dca18638.1.exon3;Parent=Dca18638.1 |
