Carnation DB

Dca1868.1

Annotation

8-exons
f-1
sp|B9IID5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_576417#GO:0000166#1F0P0C
sp|B1PAT2_LINUS#Male sterility-related protein#Linum usitatissimum (Flax) (Linum humile)#Name=MS2-F#GO:0000166;GO:0016620#2F0P0C
Repeat List (scaffold106)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1868.1	1	422	426	42.01	422	41	3e-89
Target_name	Start	End	Length	Cov(%)
sp\|B9IID5_POPTR	164	608	610	72.95

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1868.1	1	421	426	40.37	421	39	1e-83
Target_name	Start	End	Length	Cov(%)
AT3G11980.1	173	616	616	72.07

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold106	Augustus	mRNA	248253	251730	.	+	.	ID=Dca1868.1;Parent=Dca1868
scaffold106	Augustus	exon	248253	248273	.	+	.	ID=Dca1868.1.exon1;Parent=Dca1868.1
scaffold106	Augustus	exon	248542	248741	.	+	.	ID=Dca1868.1.exon2;Parent=Dca1868.1
scaffold106	Augustus	exon	249220	249320	.	+	.	ID=Dca1868.1.exon3;Parent=Dca1868.1
scaffold106	Augustus	exon	249414	249618	.	+	.	ID=Dca1868.1.exon4;Parent=Dca1868.1
scaffold106	Augustus	exon	250008	250169	.	+	.	ID=Dca1868.1.exon5;Parent=Dca1868.1
scaffold106	Augustus	exon	250777	250858	.	+	.	ID=Dca1868.1.exon6;Parent=Dca1868.1
scaffold106	Augustus	exon	251034	251371	.	+	.	ID=Dca1868.1.exon7;Parent=Dca1868.1
scaffold106	Augustus	exon	251559	251730	.	+	.	ID=Dca1868.1.exon8;Parent=Dca1868.1