Dca18718.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold19719)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18718.1 |
1 |
385 |
429 |
51.28 |
385 |
50 |
2e-100
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
381 |
771 |
1717 |
22.77 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18718.1 |
159 |
251 |
429 |
8.15 |
93 |
38 |
6e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold19719 |
Augustus |
mRNA |
16 |
1714 |
. |
+ |
. |
ID=Dca18718.1;Parent=Dca18718 |
| scaffold19719 |
Augustus |
exon |
16 |
946 |
. |
+ |
. |
ID=Dca18718.1.exon1;Parent=Dca18718.1 |
| scaffold19719 |
Augustus |
exon |
1087 |
1444 |
. |
+ |
. |
ID=Dca18718.1.exon2;Parent=Dca18718.1 |
| scaffold19719 |
Augustus |
exon |
1516 |
1714 |
. |
+ |
. |
ID=Dca18718.1.exon3;Parent=Dca18718.1 |
