Dca1874.1
Annotation
- 2-exons
- f-1
- sp|Q9LHM4_ARATH#Gypsy/Ty-3 retroelement polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=T21B14.24#GO:0005634;GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P1C
- Repeat List (scaffold1060)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1874.1 |
1 |
217 |
219 |
47.48 |
217 |
48 |
2e-54
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9LHM4_ARATH |
1268 |
1460 |
1499 |
12.87 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1874.1 |
1 |
183 |
219 |
26.48 |
183 |
32 |
3e-25
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
1249 |
1410 |
1539 |
10.52 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1060 |
Augustus |
mRNA |
4437 |
5190 |
. |
- |
. |
ID=Dca1874.1;Parent=Dca1874 |
| scaffold1060 |
Augustus |
exon |
4437 |
4885 |
. |
- |
. |
ID=Dca1874.1.exon1;Parent=Dca1874.1 |
| scaffold1060 |
Augustus |
exon |
4980 |
5190 |
. |
- |
. |
ID=Dca1874.1.exon2;Parent=Dca1874.1 |
