Carnation DB

Dca18855.1

Annotation

5-exons
f-1
sp|O81068_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g28980#GO:0003723;GO:0003964;GO:0008270;GO:0006278#3F1P0C
Repeat List (scaffold1983)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18855.1	42	200	403	18.11	159	46	3e-35
Target_name	Start	End	Length	Cov(%)
sp\|O81068_ARATH	764	922	1529	10.39

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18855.1	57	196	403	13.89	140	40	1e-22
Target_name	Start	End	Length	Cov(%)
Os06t0484800-00	377	517	857	16.45

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1983	Augustus	mRNA	15421	17469	.	+	.	ID=Dca18855.1;Parent=Dca18855
scaffold1983	Augustus	exon	15421	16020	.	+	.	ID=Dca18855.1.exon1;Parent=Dca18855.1
scaffold1983	Augustus	exon	16121	16163	.	+	.	ID=Dca18855.1.exon2;Parent=Dca18855.1
scaffold1983	Augustus	exon	16300	16440	.	+	.	ID=Dca18855.1.exon3;Parent=Dca18855.1
scaffold1983	Augustus	exon	16856	17036	.	+	.	ID=Dca18855.1.exon4;Parent=Dca18855.1
scaffold1983	Augustus	exon	17223	17469	.	+	.	ID=Dca18855.1.exon5;Parent=Dca18855.1