Carnation DB

Dca18894.1

Annotation

10-exons
f-1
sp|F6HR54_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0040g01360#GO:0005524;GO:0004821;GO:0006427#2F1P0C
sp|B9S0H3_RICCO#Histidyl-tRNA synthetase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1354890#GO:0005737;GO:0005524;GO:0004821;GO:0006427#2F1P1C
Repeat List (scaffold1986)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18894.1	16	128	489	14.31	113	58	3e-30
Target_name	Start	End	Length	Cov(%)
sp\|F6HR54_VITVI	29	146	505	23.36

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18894.1	67	128	489	10.83	62	86	2e-28
Target_name	Start	End	Length	Cov(%)
AT3G46100.1	66	127	486	12.75

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1986	Augustus	mRNA	35050	46607	.	+	.	ID=Dca18894.1;Parent=Dca18894
scaffold1986	Augustus	exon	35050	35337	.	+	.	ID=Dca18894.1.exon1;Parent=Dca18894.1
scaffold1986	Augustus	exon	35486	35581	.	+	.	ID=Dca18894.1.exon2;Parent=Dca18894.1
scaffold1986	Augustus	exon	37333	37425	.	+	.	ID=Dca18894.1.exon3;Parent=Dca18894.1
scaffold1986	Augustus	exon	39054	39128	.	+	.	ID=Dca18894.1.exon4;Parent=Dca18894.1
scaffold1986	Augustus	exon	39486	39603	.	+	.	ID=Dca18894.1.exon5;Parent=Dca18894.1
scaffold1986	Augustus	exon	41743	41885	.	+	.	ID=Dca18894.1.exon6;Parent=Dca18894.1
scaffold1986	Augustus	exon	43233	43361	.	+	.	ID=Dca18894.1.exon7;Parent=Dca18894.1
scaffold1986	Augustus	exon	43656	43819	.	+	.	ID=Dca18894.1.exon8;Parent=Dca18894.1
scaffold1986	Augustus	exon	43941	44061	.	+	.	ID=Dca18894.1.exon9;Parent=Dca18894.1
scaffold1986	Augustus	exon	46365	46607	.	+	.	ID=Dca18894.1.exon10;Parent=Dca18894.1