Carnation DB

Dca18912.1

Annotation

6-exons
f-1
sp|A9PEQ8_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0005634;GO:0003677;GO:0006355#1F1P1C
sp|B9RWI5_RICCO#Transcription factor, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1019810#GO:0005634;GO:0003677;GO:0006355#1F1P1C
Repeat List (scaffold1988)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18912.1	16	292	292	63.69	277	66	5e-97
Target_name	Start	End	Length	Cov(%)
sp\|A9PEQ8_POPTR	28	306	309	90.29

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18912.1	16	289	292	54.79	274	57	2e-78
Target_name	Start	End	Length	Cov(%)
AT4G13640.2	27	289	295	89.15

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1988	Augus-PASA	mRNA	13672	16885	.	+	.	ID=Dca18912.1;Parent=Dca18912
scaffold1988	Augus-PASA	exon	13672	13822	.	+	.	ID=Dca18912.1.exon1;Parent=Dca18912.1
scaffold1988	Augus-PASA	exon	15389	15465	.	+	.	ID=Dca18912.1.exon2;Parent=Dca18912.1
scaffold1988	Augus-PASA	exon	15703	15757	.	+	.	ID=Dca18912.1.exon3;Parent=Dca18912.1
scaffold1988	Augus-PASA	exon	16073	16148	.	+	.	ID=Dca18912.1.exon4;Parent=Dca18912.1
scaffold1988	Augus-PASA	exon	16253	16322	.	+	.	ID=Dca18912.1.exon5;Parent=Dca18912.1
scaffold1988	Augus-PASA	exon	16436	16885	.	+	.	ID=Dca18912.1.exon6;Parent=Dca18912.1