Dca18975.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold19928)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18975.1 |
49 |
768 |
768 |
47.39 |
720 |
47 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
33 |
801 |
1501 |
51.23 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18975.1 |
300 |
768 |
768 |
22.39 |
469 |
36 |
5e-87
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
18 |
490 |
707 |
66.9 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold19928 |
Augustus |
mRNA |
35 |
2448 |
. |
- |
. |
ID=Dca18975.1;Parent=Dca18975 |
| scaffold19928 |
Augustus |
exon |
35 |
1794 |
. |
- |
. |
ID=Dca18975.1.exon1;Parent=Dca18975.1 |
| scaffold19928 |
Augustus |
exon |
1903 |
2448 |
. |
- |
. |
ID=Dca18975.1.exon2;Parent=Dca18975.1 |
