Dca18983.1
Annotation
- 4-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold1993)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18983.1 |
33 |
656 |
818 |
32.02 |
624 |
40 |
3e-112
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
102 |
718 |
1717 |
35.93 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18983.1 |
444 |
532 |
818 |
3.54 |
89 |
32 |
8e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
188 |
192 |
47.39 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1993 |
Augustus |
mRNA |
53294 |
60067 |
. |
- |
. |
ID=Dca18983.1;Parent=Dca18983 |
| scaffold1993 |
Augustus |
exon |
53294 |
53383 |
. |
- |
. |
ID=Dca18983.1.exon1;Parent=Dca18983.1 |
| scaffold1993 |
Augustus |
exon |
55129 |
55214 |
. |
- |
. |
ID=Dca18983.1.exon2;Parent=Dca18983.1 |
| scaffold1993 |
Augustus |
exon |
55320 |
57514 |
. |
- |
. |
ID=Dca18983.1.exon3;Parent=Dca18983.1 |
| scaffold1993 |
Augustus |
exon |
59982 |
60067 |
. |
- |
. |
ID=Dca18983.1.exon4;Parent=Dca18983.1 |
