Carnation DB

Dca19079.1

Annotation

9-exons
f-1
sp|A9PEE7_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#unknown#0F0P0C
AT1G02090.1 | Symbols: FUS5, CSN7, COP15, ATCSN7 | Proteasome component (PCI) domain protein | chr1:387479-389568 REVERSE LENGTH=260
Repeat List (scaffold2)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19079.1	1	257	260	78.84	257	80	3e-119
Target_name	Start	End	Length	Cov(%)
sp\|A9PEE7_POPTR	1	257	259	99.22

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19079.1	1	257	260	73.07	257	74	3e-113
Target_name	Start	End	Length	Cov(%)
AT1G02090.1	1	257	260	98.84

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2	Augus-PASA	mRNA	349427	354057	.	-	.	ID=Dca19079.1;Parent=Dca19079
scaffold2	Augus-PASA	exon	349427	349451	.	-	.	ID=Dca19079.1.exon1;Parent=Dca19079.1
scaffold2	Augus-PASA	exon	349969	350057	.	-	.	ID=Dca19079.1.exon2;Parent=Dca19079.1
scaffold2	Augus-PASA	exon	350490	350628	.	-	.	ID=Dca19079.1.exon3;Parent=Dca19079.1
scaffold2	Augus-PASA	exon	351236	351306	.	-	.	ID=Dca19079.1.exon4;Parent=Dca19079.1
scaffold2	Augus-PASA	exon	351437	351481	.	-	.	ID=Dca19079.1.exon5;Parent=Dca19079.1
scaffold2	Augus-PASA	exon	352010	352099	.	-	.	ID=Dca19079.1.exon6;Parent=Dca19079.1
scaffold2	Augus-PASA	exon	352453	352541	.	-	.	ID=Dca19079.1.exon7;Parent=Dca19079.1
scaffold2	Augus-PASA	exon	353270	353345	.	-	.	ID=Dca19079.1.exon8;Parent=Dca19079.1
scaffold2	Augus-PASA	exon	353899	354057	.	-	.	ID=Dca19079.1.exon9;Parent=Dca19079.1