Carnation DB

Dca19082.1

Annotation

5-exons
f-1
sp|B9NAE8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_587061#unknown#0F0P0C
Repeat List (scaffold2)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19082.1	24	467	479	34.86	444	36	7e-50
Target_name	Start	End	Length	Cov(%)
sp\|B9NAE8_POPTR	38	475	475	92.21

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19082.1	24	306	479	23.59	283	39	8e-41
Target_name	Start	End	Length	Cov(%)
AT4G37440.1	27	308	471	59.87

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2	Augustus	mRNA	377454	381093	.	-	.	ID=Dca19082.1;Parent=Dca19082
scaffold2	Augustus	exon	377454	377729	.	-	.	ID=Dca19082.1.exon1;Parent=Dca19082.1
scaffold2	Augustus	exon	378025	378434	.	-	.	ID=Dca19082.1.exon2;Parent=Dca19082.1
scaffold2	Augustus	exon	379162	379218	.	-	.	ID=Dca19082.1.exon3;Parent=Dca19082.1
scaffold2	Augustus	exon	379633	379943	.	-	.	ID=Dca19082.1.exon4;Parent=Dca19082.1
scaffold2	Augustus	exon	380708	381093	.	-	.	ID=Dca19082.1.exon5;Parent=Dca19082.1