Carnation DB

Dca1912.1

Annotation

6-exons
f-1
sp|B9T2I5_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0101400#GO:0003779;GO:0030036#1F1P0C
AT3G25500.1 | Symbols: AFH1, FH1, AHF1, ATFH1 | formin homology 1 | chr3:9251320-9254826 REVERSE LENGTH=1051
Repeat List (scaffold10617)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1912.1	8	354	961	15.19	347	39	4e-25
Target_name	Start	End	Length	Cov(%)
sp\|B9T2I5_RICCO	7	342	1140	29.47

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1912.1	511	940	961	31.11	430	69	3e-157
Target_name	Start	End	Length	Cov(%)
AT3G25500.1	540	950	1051	39.1

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10617	Augustus	mRNA	3380	7744	.	+	.	ID=Dca1912.1;Parent=Dca1912
scaffold10617	Augustus	exon	3380	5223	.	+	.	ID=Dca1912.1.exon1;Parent=Dca1912.1
scaffold10617	Augustus	exon	5323	5522	.	+	.	ID=Dca1912.1.exon2;Parent=Dca1912.1
scaffold10617	Augustus	exon	6489	6733	.	+	.	ID=Dca1912.1.exon3;Parent=Dca1912.1
scaffold10617	Augustus	exon	6821	7350	.	+	.	ID=Dca1912.1.exon4;Parent=Dca1912.1
scaffold10617	Augustus	exon	7495	7559	.	+	.	ID=Dca1912.1.exon5;Parent=Dca1912.1
scaffold10617	Augustus	exon	7650	7744	.	+	.	ID=Dca1912.1.exon6;Parent=Dca1912.1