Carnation DB

Dca19125.1

Annotation

6-exons
f-1
sp|B9RDC3_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1611980#unknown#0F0P0C
AT2G45380.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT4G34070.1); Has 171 Blast hits to 170 proteins in 31 species: Archae - 2; Bacteria - 0; Metazoa - 68; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). | chr2:18699588-18703093 REVERSE LENGTH=494
Repeat List (scaffold2)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19125.1	5	251	288	46.52	247	52	7e-57
Target_name	Start	End	Length	Cov(%)
sp\|B9RDC3_RICCO	3	247	260	94.23

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19125.1	29	288	288	42.01	260	45	2e-48
Target_name	Start	End	Length	Cov(%)
AT2G45380.1	239	494	494	51.82

seqname	source	feature	start	end	score	strand	frame	group
scaffold2	Augustus	mRNA	757397	758957	.	-	.	ID=Dca19125.1;Parent=Dca19125
scaffold2	Augustus	exon	757397	757554	.	-	.	ID=Dca19125.1.exon1;Parent=Dca19125.1
scaffold2	Augustus	exon	757829	757894	.	-	.	ID=Dca19125.1.exon2;Parent=Dca19125.1
scaffold2	Augustus	exon	757981	758056	.	-	.	ID=Dca19125.1.exon3;Parent=Dca19125.1
scaffold2	Augustus	exon	758217	758297	.	-	.	ID=Dca19125.1.exon4;Parent=Dca19125.1
scaffold2	Augustus	exon	758394	758548	.	-	.	ID=Dca19125.1.exon5;Parent=Dca19125.1
scaffold2	Augustus	exon	758627	758957	.	-	.	ID=Dca19125.1.exon6;Parent=Dca19125.1