Carnation DB

Dca19159.1

Annotation

7-exons
f-1
sp|F5HPS4_9CARY#Suppressor of overexpression of constans 1#Gypsophila paniculata#Name=GpSOC1#GO:0005634;GO:0003677;GO:0046983;GO:0003700;GO:0006351#3F1P1C
Repeat List (scaffold2)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19159.1	1	219	221	79.18	219	80	6e-96
Target_name	Start	End	Length	Cov(%)
sp\|F5HPS4_9CARY	1	218	221	98.64

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19159.1	1	217	221	59.72	217	61	2e-66
Target_name	Start	End	Length	Cov(%)
AT2G45660.1	1	214	214	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2	Augus-PASA	mRNA	982467	988100	.	-	.	ID=Dca19159.1;Parent=Dca19159
scaffold2	Augus-PASA	exon	982467	982616	.	-	.	ID=Dca19159.1.exon1;Parent=Dca19159.1
scaffold2	Augus-PASA	exon	983470	983511	.	-	.	ID=Dca19159.1.exon2;Parent=Dca19159.1
scaffold2	Augus-PASA	exon	983613	983654	.	-	.	ID=Dca19159.1.exon3;Parent=Dca19159.1
scaffold2	Augus-PASA	exon	983782	983881	.	-	.	ID=Dca19159.1.exon4;Parent=Dca19159.1
scaffold2	Augus-PASA	exon	984434	984495	.	-	.	ID=Dca19159.1.exon5;Parent=Dca19159.1
scaffold2	Augus-PASA	exon	984631	984718	.	-	.	ID=Dca19159.1.exon6;Parent=Dca19159.1
scaffold2	Augustus	exon	987919	988100	.	-	.	ID=Dca19159.1.exon7;Parent=Dca19159.1