Dca1926.1
Annotation
- 3-exons
- f-1
- sp|Q2QSC3_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g24610#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold1062)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1926.1 |
1 |
142 |
164 |
49.39 |
142 |
57 |
3e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2QSC3_ORYSJ |
1409 |
1552 |
1639 |
8.78 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1926.1 |
1 |
76 |
164 |
15.85 |
76 |
35 |
3e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1103 |
1178 |
1401 |
5.42 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1062 |
Augustus |
mRNA |
81534 |
83869 |
. |
- |
. |
ID=Dca1926.1;Parent=Dca1926 |
| scaffold1062 |
Augustus |
exon |
81534 |
81602 |
. |
- |
. |
ID=Dca1926.1.exon1;Parent=Dca1926.1 |
| scaffold1062 |
Augustus |
exon |
83243 |
83439 |
. |
- |
. |
ID=Dca1926.1.exon2;Parent=Dca1926.1 |
| scaffold1062 |
Augustus |
exon |
83641 |
83869 |
. |
- |
. |
ID=Dca1926.1.exon3;Parent=Dca1926.1 |
