Dca19290.1
Annotation
- 4-exons
- f-1
- sp|B9GKK9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_640520#GO:0005673;GO:0006367#0F1P1C
- Os10t0397200-01 Transcription initiation factor TFIIE, beta subunit domain containing protein.
- Repeat List (scaffold200)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19290.1 |
1 |
290 |
294 |
60.88 |
290 |
62 |
2e-94
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GKK9_POPTR |
1 |
282 |
284 |
99.29 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19290.1 |
1 |
290 |
294 |
54.42 |
290 |
55 |
1e-86
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os10t0397200-01 |
1 |
277 |
280 |
98.92 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold200 |
Augustus |
mRNA |
115655 |
117578 |
. |
+ |
. |
ID=Dca19290.1;Parent=Dca19290 |
| scaffold200 |
Augustus |
exon |
115655 |
115945 |
. |
+ |
. |
ID=Dca19290.1.exon1;Parent=Dca19290.1 |
| scaffold200 |
Augus-PASA |
exon |
116388 |
116519 |
. |
+ |
. |
ID=Dca19290.1.exon2;Parent=Dca19290.1 |
| scaffold200 |
Augus-PASA |
exon |
116599 |
116715 |
. |
+ |
. |
ID=Dca19290.1.exon3;Parent=Dca19290.1 |
| scaffold200 |
Augus-PASA |
exon |
117234 |
117578 |
. |
+ |
. |
ID=Dca19290.1.exon4;Parent=Dca19290.1 |
